species:   Vamal
pid:       PID2035
parent:    PC-136623_4
paralog:   
locus:     CM003104.1:2981414-2981510
matures:   ['UCGGCUUAGUAUCGGUAACGU', 'GGCUAUCGGUAUUAAGCCUUAG']
srr:       SRR9103190
genome:    /Users/jax/+Genomes/Fungal_genomes/Vamal.GCA_000818155.1_ASM81815v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Guo2021-na.SRR9103190.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Guo2021-na.SRR9103190.cram CM003104.1:2981414-2981510

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

              ***********************                                ************************    
UAUAGUCGGCGAUGCUUCGGCUUAGUAUCGGUAACGUAACGACUGCGCUUCGGCUAUAAUAAGCUUUCGGCGGCUAUCGGUAUUAAGCCUUAGCCCA
.......((....(((..(((((((((((((((.(((..(((..((................))..))))))..)))))))))))))))..))))).
----------------UCGGCUUAGUAUCGGUAACGU------------------------------------------------------------ l=21 a=0 c
-----------------------------------------------------------------------GGCUAUCGGUAUUAAGCCUUAG---- l=22 a=0 c*
----------------UCGGCUUAGUAUCGGUAACGU------------------------------------------------------------ l=21 a=0 ma
-----------------------------------------------------------------------GGCUAUCGGUAUUAAGCCUUAG---- l=22 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011100
fn-001
